BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035B12SP1|AL430012
(885 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1794 1732 0.0
>3x_Contig1794
Length = 36744
Score = 1732 bits (873), Expect = 0.0
Identities = 883/886 (99%), Gaps = 1/886 (0%)
Strand = Plus / Minus
Query: 1 gatcgtgatatgaagaaatattatctagctagagtaaaaggaaaatttcctgaaactgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23763 gatcgtgatatgaagaaatattatctagctagagtaaaaggaaaatttcctgaaactgca 23704
Query: 61 gttgataaatccccaatctatacctgtgacttgaaaattaaatcagagccattatcccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23703 gttgataaatccccaatctatacctgtgacttgaaaattaaatcagagccattatcccct 23644
Query: 121 ttgaaagacgcacatactgagtttgaattaatggaatacgatgccgtaactgatcaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23643 ttgaaagacgcacatactgagtttgaattaatggaatacgatgccgtaactgatcaatca 23584
Query: 181 attgtattatgcaaacctttcacgggaagaacacatcaaattcgtatccatttggcaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23583 attgtattatgcaaacctttcacgggaagaacacatcaaattcgtatccatttggcaaga 23524
Query: 241 cagggacaccccattacaaacgatccgttttataaccttgataactcaacgtacccatta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23523 cagggacaccccattacaaacgatccgttttataaccttgataactcaacgtacccatta 23464
Query: 301 cggtcaaggtttattattgagaccccagattggactcaactaacaaacgaaagaatcgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23463 cggtcaaggtttattattgagaccccagattggactcaactaacaaacgaaagaatcgaa 23404
Query: 361 aagctacggaagcggttcgaggttgaactggatgatgtctgggatcaattgaatgaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23403 aagctacggaagcggttcgaggttgaactggatgatgtctgggatcaattgaatgaaaat 23344
Query: 421 caagaacgatgtcctgaatgcgacgaagaaatgccaaaagatccaactccagaatcgtta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23343 caagaacgatgtcctgaatgcgacgaagaaatgccaaaagatccaactccagaatcgtta 23284
Query: 481 gagctatatctacatgcttggagatacaaaggtttggatttggagtttgaaacagattat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23283 gagctatatctacatgcttggagatacaaaggtttggatttggagtttgaaacagattat 23224
Query: 541 ccctactgggcgaagttcgaaaatgagaaacaagcttaacatcaagttttgagttgtttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23223 ccctactgggcgaagttcgaaaatgagaaacaagcttaacatcaagttttgagttgtttc 23164
Query: 601 tttattcatgtatttnacttttttagtatccttctcaatcaatattgtatatactatata 660
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23163 tttattcatgtatttaacttttttagtatccttctcaatcaatattgtatatactatata 23104
Query: 661 tttmttcaaatagcagcatatgtgttcttgcatttgttcttcaagaggtcaatttgtttt 720
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23103 tttattcaaatagcagcatatgtgttcttgcatttgttcttcaagaggtcaatttgtttt 23044
Query: 721 acttccttgtatcattcttaccaaccaatgtccttgcgatgtactggcttgg-caccttt 779
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 23043 acttccttgtatcattcttaccaaccaatgtccttgcgatgtactggcttggccaccttt 22984
Query: 780 aactttcctttagtcaagttttcaagtggatacatagatactttgcactcaccaccaagc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22983 aactttcctttagtcaagttttcaagtggatacatagatactttgcactcaccaccaagc 22924
Query: 840 tcttcaatcactgataaagattgagtttcaagatccacagatttta 885
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22923 tcttcaatcactgataaagattgagtttcaagatccacagatttta 22878
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7316
Number of Sequences: 1807
Number of extensions: 7316
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 885
length of database: 10,358,551
effective HSP length: 16
effective length of query: 869
effective length of database: 10,329,639
effective search space: 8976456291
effective search space used: 8976456291
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)